Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chrX | 83838051 | 83839860 | chrX:83838051-83839860:-:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.02 |
0.64 |
0.58 |
0.63 |
0.84 |
0.75 |
0.73 |
0.78 |
0.95 |
0.47 |
0.7 |
0.96 |
chrX | 84079011 | 84080387 | chrX:84079011-84080387:+:L1P3:REF | L1P3 | REF | 3prime-truncated | RPS6KA6 | 0.02 |
0.39 |
0.35 |
0.09 |
0.63 |
0.84 |
0.03 |
0.54 |
0.84 |
0.31 |
0.83 |
0.88 |
chrX | 85529213 | 85535230 | chrX:85529213-85535230:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | 0.76 |
0.4 |
0.46 |
0.12 |
— | 0.01 |
— | — | 0.14 |
0.35 |
0.98 |
chrX | 85733685 | 85734499 | chrX:85733685-85734499:+:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.01 |
0.73 |
0.16 |
0.04 |
0.87 |
0.38 |
0.54 |
0.71 |
0.93 |
0.16 |
0.64 |
0.93 |
chrX | 85751722 | 85757867 | chrX:85751722-85757867:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.89 |
0.68 |
0.06 |
0.93 |
0.5 |
0.06 |
0.57 |
0.87 |
0.29 |
0.51 |
0.98 |
chrX | 86054298 | 86054856 | chrX:86054298-86054856:-:L1P2:REF | L1P2 | REF | 3prime-truncated | CHM | 0.11 |
0.88 |
0.37 |
0.56 |
0.85 |
0.72 |
0.68 |
0.71 |
0.92 |
0.44 |
0.72 |
0.98 |
chrX | 86113292 | 86119348 | chrX:86113292-86119348:-:L1PA3:REF | L1PA3 | REF | full-length | — | — | 0.86 |
0.71 |
0.73 |
0.83 |
0.72 |
0.78 |
0.79 |
0.94 |
0.57 |
0.73 |
0.94 |
chrX | 86289420 | 86295425 | chrX:86289420-86295425:-:L1PA3:REF | L1PA3 | REF | full-length | DACH2 | — | — | — | — | 0.1 |
— | — | — | — | — | 0.83 |
0.88 |
chrX | 86969631 | 86975651 | chrX:86969631-86975651:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.72 |
0.65 |
0.62 |
0.63 |
0.79 |
0.65 |
0.78 |
0.94 |
0.44 |
0.8 |
0.98 |
chrX | 87116306 | 87122337 | chrX:87116306-87122337:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.53 |
0.38 |
0.24 |
0.87 |
0.5 |
0.06 |
0.47 |
0.78 |
0.09 |
0.41 |
0.81 |
chrX | 87443100 | 87449269 | chrX:87443100-87449269:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.52 |
0.84 |
0.63 |
0.42 |
0.89 |
0.66 |
0.71 |
0.8 |
0.93 |
0.17 |
0.78 |
0.98 |
chrX | 87821407 | 87827419 | chrX:87821407-87827419:+:L1HS:REF | L1HS | REF | full-length | — | 0.03 |
0.9 |
0.75 |
0.64 |
0.39 |
0.81 |
0.85 |
0.75 |
0.91 |
0.61 |
0.86 |
0.98 |
chrX | 88207885 | 88213919 | chrX:88207885-88213919:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.7 |
0.72 |
0.79 |
0.51 |
0.84 |
0.82 |
0.76 |
0.92 |
0.55 |
0.83 |
0.92 |
chrX | 88694206 | 88696485 | chrX:88694206-88696485:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | — | — | — | — | — | — | — | — | — | — | 0.03 |
— |
chrX | 88781409 | 88787562 | chrX:88781409-88787562:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.8 |
0.67 |
0.73 |
0.92 |
0.77 |
0.71 |
0.64 |
0.95 |
0.42 |
0.8 |
0.85 |
chrX | 89292629 | 89298657 | chrX:89292629-89298657:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.77 |
0.55 |
0.63 |
0.9 |
0.69 |
0.62 |
0.79 |
0.84 |
— | 0.63 |
0.99 |
chrX | 91469486 | 91471847 | chrX:91469486-91471847:+:L1P3:REF | L1P3 | REF | 3prime-truncated | — | — | — | — | — | — | — | — | — | — | — | 0.0 |
— |
chrX | 91627096 | 91633253 | chrX:91627096-91633253:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | 0.88 |
0.72 |
0.82 |
0.91 |
0.75 |
0.77 |
0.84 |
— | 0.48 |
0.85 |
0.97 |
chrX | 91752800 | 91758828 | chrX:91752800-91758828:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.01 |
0.62 |
0.47 |
0.05 |
0.74 |
0.74 |
0.77 |
0.95 |
0.35 |
0.71 |
0.99 |
chrX | 91819650 | 91825702 | chrX:91819650-91825702:-:L1PA3:REF | L1PA3 | REF | full-length | PCDH11X | 0.02 |
0.8 |
0.77 |
0.89 |
0.7 |
0.8 |
0.85 |
0.81 |
0.96 |
0.64 |
0.79 |
0.98 |
chrX | 92215061 | 92221212 | chrX:92215061-92221212:+:L1PA3:REF | L1PA3 | REF | full-length | PCDH11X | 0.02 |
0.8 |
0.64 |
0.9 |
0.86 |
0.76 |
0.74 |
0.86 |
0.89 |
0.53 |
0.75 |
0.92 |
chrX | 92254241 | 92256469 | chrX:92254241-92256469:-:L1HS:REF | L1HS | REF | 3prime-truncated | PCDH11X | 0.03 |
0.86 |
0.59 |
0.91 |
0.91 |
0.72 |
0.78 |
0.82 |
0.94 |
0.38 |
0.74 |
0.95 |
chrX | 93060238 | 93066331 | chrX:93060238-93066331:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.52 |
0.46 |
0.8 |
0.91 |
0.58 |
0.6 |
0.67 |
0.92 |
0.55 |
0.68 |
0.97 |
chrX | 93627330 | 93633481 | chrX:93627330-93633481:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | 0.34 |
0.16 |
0.77 |
— | 0.6 |
0.5 |
— | 0.14 |
0.53 |
— |
chrX | 93939741 | 93945900 | chrX:93939741-93945900:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.06 |
0.81 |
0.73 |
0.66 |
0.44 |
0.73 |
— | 0.74 |
0.81 |
0.61 |
0.72 |
0.87 |
chrX | 94862375 | 94868400 | chrX:94862375-94868400:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.01 |
0.57 |
0.38 |
0.42 |
0.62 |
0.22 |
0.67 |
0.97 |
0.34 |
0.67 |
0.97 |
chrX | 96057824 | 96063842 | chrX:96057824-96063842:-:L1HS:REF | L1HS | REF | full-length | — | 0.03 |
0.47 |
0.93 |
0.68 |
0.04 |
0.88 |
0.82 |
0.79 |
0.88 |
0.6 |
0.83 |
0.53 |
chrX | 96269391 | 96275726 | chrX:96269391-96275726:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.8 |
0.4 |
0.45 |
0.76 |
0.66 |
0.63 |
0.68 |
0.84 |
0.29 |
0.65 |
0.87 |
chrX | 96427606 | 96430043 | chrX:96427606-96430043:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | — | — | 0.64 |
0.03 |
0.47 |
0.95 |
— | 0.73 |
— | 0.72 |
— | — |
chrX | 96597640 | 96603783 | chrX:96597640-96603783:+:L1PA5:REF | L1PA5 | REF | full-length | — | — | — | 0.77 |
0.46 |
0.89 |
— | — | — | — | 0.44 |
0.81 |
— |
chrX | 96809518 | 96815659 | chrX:96809518-96815659:-:L1PA6:REF | L1PA6 | REF | full-length | DIAPH2 | — | — | — | — | — | — | — | — | — | 0.84 |
0.99 |
— |
chrX | 97509510 | 97515511 | chrX:97509510-97515511:-:L1PA3:REF | L1PA3 | REF | full-length | DIAPH2 | 0.17 |
0.93 |
0.81 |
0.94 |
0.75 |
0.98 |
0.97 |
0.91 |
0.99 |
0.74 |
0.97 |
0.98 |
chrX | 97578170 | 97584188 | chrX:97578170-97584188:-:L1PA3:REF | L1PA3 | REF | full-length | DIAPH2 | — | — | 0.79 |
— | — | — | — | — | — | — | — | — |
chrX | 98234872 | 98241308 | chrX:98234872-98241308:-:L1PA7:REF | L1PA7 | REF | full-length | — | — | — | — | — | — | — | — | — | — | — | 0.36 |
— |
chrX | 98300352 | 98306364 | chrX:98300352-98306364:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.09 |
0.72 |
0.5 |
0.9 |
0.7 |
0.75 |
0.81 |
0.96 |
0.39 |
0.76 |
0.96 |
chrX | 98424325 | 98430357 | chrX:98424325-98430357:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.03 |
— | 0.82 |
0.64 |
0.91 |
0.82 |
0.69 |
0.84 |
0.94 |
0.65 |
0.78 |
0.97 |
chrX | 98687494 | 98693514 | chrX:98687494-98693514:-:L1PA2:REF | L1PA2 | REF | full-length | — | — | — | 0.8 |
— | 0.74 |
— | — | — | — | 0.66 |
0.71 |
— |
chrX | 99234633 | 99240760 | chrX:99234633-99240760:+:L1PA4:REF | L1PA4 | REF | full-length | — | — | 0.1 |
0.28 |
0.1 |
0.94 |
0.52 |
0.21 |
0.47 |
— | 0.08 |
0.61 |
0.94 |
chrX | 100156850 | 100163024 | chrX:100156850-100163024:-:L1PA7:REF | L1PA7 | REF | full-length | — | — | — | — | — | — | — | — | — | — | — | 0.07 |
— |
chrX | 100236224 | 100236943 | chrX:100236224-100236943:-:L1P3:REF | L1P3 | REF | 3prime-truncated | — | — | — | 0.4 |
0.12 |
0.23 |
— | 0.27 |
0.43 |
— | 0.17 |
0.52 |
— |
chrX | 100255486 | 100261633 | chrX:100255486-100261633:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.45 |
— | 0.16 |
0.88 |
0.67 |
0.23 |
0.68 |
0.93 |
0.14 |
0.53 |
0.96 |
chrX | 100550262 | 100555448 | chrX:100550262-100555448:+:L1PA2:REF | L1PA2 | REF | 3prime-truncated | — | 0.09 |
0.89 |
0.76 |
0.73 |
0.1 |
0.78 |
0.68 |
0.73 |
0.85 |
0.66 |
0.81 |
0.95 |
chrX | 101524342 | 101530496 | chrX:101524342-101530496:+:L1PA6:REF | L1PA6 | REF | full-length | ARMCX4 | 0.01 |
0.54 |
0.4 |
0.04 |
0.49 |
0.94 |
0.43 |
0.73 |
— | 0.08 |
0.44 |
— |
chrX | 101580035 | 101586192 | chrX:101580035-101586192:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.64 |
0.71 |
0.73 |
0.89 |
0.58 |
0.41 |
0.8 |
0.92 |
0.32 |
0.59 |
0.98 |
chrX | 101711073 | 101717106 | chrX:101711073-101717106:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.83 |
0.76 |
0.83 |
0.89 |
0.81 |
0.84 |
0.79 |
0.96 |
0.54 |
0.8 |
0.98 |
chrX | 101809661 | 101811838 | chrX:101809661-101811838:-:L1PA5:REF | L1PA5 | REF | 3prime-truncated | — | 0.01 |
0.75 |
0.52 |
0.54 |
0.87 |
0.69 |
0.21 |
0.57 |
0.93 |
0.31 |
0.72 |
0.92 |
chrX | 101949871 | 101950261 | chrX:101949871-101950261:+:L1PA8:REF | L1PA8 | REF | 3prime-truncated | — | — | — | — | — | — | — | — | — | — | — | 0.17 |
— |
chrX | 102685896 | 102692023 | chrX:102685896-102692023:-:L1PA4:REF | L1PA4 | REF | full-length | ARMCX5-GPRASP2 | 0.42 |
0.49 |
0.64 |
0.98 |
0.9 |
0.96 |
0.98 |
0.81 |
0.94 |
0.65 |
0.99 |
0.99 |
chrX | 102871176 | 102877321 | chrX:102871176-102877321:-:L1PA4:REF | L1PA4 | REF | full-length | ARMCX5-GPRASP2 | 0.96 |
0.83 |
0.69 |
0.97 |
0.97 |
0.96 |
0.96 |
0.78 |
0.97 |
0.78 |
0.97 |
0.97 |
chrX | 103020459 | 103026616 | chrX:103020459-103026616:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.2 |
— | 0.57 |
— | 0.59 |
— | — | — | — | 0.46 |
0.6 |
— |